Mostafa Jahanifar

Cross-linking breast tumor transcriptomic states and tissue histology

2023 · Cell Reports Medicine

Identification of the gene expression state of a cancer patient from routine pathology imaging and characterization of its phenotypic effects have significant clinical and therapeutic implications. However, prediction of expression of individual genes from whole …

From Traditional to Deep Learning Approaches in Whole Slide Image Registration: A Methodological Review

2025 · arXiv (Cornell University)

Whole slide image (WSI) registration is an essential task for analysing the tumour microenvironment (TME) in histopathology. It involves the alignment of spatial information between WSIs of the same section or serial sections of a …