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A Simplified Positional Cell Type Visualization using Spatially Aggregated Clusters

  • arXiv (Cornell University)
  • Cornell University
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Abstract

We introduce a novel method for overlaying cell type proportion data onto tissue images. This approach preserves spatial context while avoiding visual clutter or excessively obscuring the underlying slide. Our proposed technique involves clustering the data and aggregating neighboring points of the same cluster into polygons.

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Publication details

DOI
10.48550/arxiv.2410.07125
OpenAlex
W4403345882
Document type
preprint
Language
EN
Source
arXiv (Cornell University)
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